Publications

You can also find my articles on my Google Scholar profile.
Updated: 28/Nov/2018.

Articles currently submitted/under peer review

  1. Saalasti, S., Alho, J., Bar, M., Glerean, E., Honkela, T., Kauppila, M., Sams, M., Jaaskelainen, I. (preprint).
    Inferior parietal lobule and early visual areas support elicitation of individualized meanings during narrative listening
    [Preprocessed the data,designed statistical procedures, wrote the manuscript]
  2. Saalasti, S., Alho, J., Lahnakoski, J., Bacha-Trams, M., Glerean, E., Jaaskelainen, I., Hasson, U. and Sams, M. (preprint).
    Skilled lipreaders read and listen to lips
    [Devised new cross-ISC methods, analysed the data, helped with online data collection, wrote the manuscript]

Peer-reviewed articles in international scientific journals

  1. Bacha-Trams M., Alexandrov Y., Broman E., Glerean E., Kauppila M., Kauttonen J., Ryyppö E., Sams M., Jääskeläinen I.P. (in press)
    A drama movie activates brains of holistic and analytical thinkers differentially
    Social Cognitive and Affective Neuroscience doi:10.1093/scan/nsy099
    [Helped with choices regarding data analysis and methods, analysed physiological data and supervised most of data analysis, wrote the manuscript]
  2. Karjalainen T., Seppälä K., Glerean E., Karlsson H.K., Lahnakoski J.M., Nuutila P., Jääskeläinen I.P., Hari R., Sams M., Nummenmaa L. (in press)
    Opioidergic Regulation of Emotional Arousal: A Combined PET–fMRI Study
    Cerebral Cortex doi:10.1093/cercor/bhy281
    [Helped with choices regarding data analysis and methods, wrote the manuscript]
  3. Nummenmaa L., Hari R., Hietanen J.,Glerean, E. (in press)
    Maps of subjective feelings
    Proceedings of the National Academy of Sciences doi:10.1073/pnas.1807390115
    Data and code: https://zenodo.org/record/1291729

    [Designed the study, built the tools for data collection, data analysis and visualization, analysed and visualised the data, wrote the manuscript]
  4. Gotsopoulos, A., Saarimäki, H., Glerean, E., Jaaskelainen, P., Sams, M., Nummenmaa, L., Lampinen, J. (in press)
    Reproducibility of importance extraction methods in neural network based fMRI classification
    Neuroimage 10.1016/j.neuroimage.2018.06.076
    Biorxiv link: https://www.biorxiv.org/content/early/2017/10/02/197277

    [Contributed to the design of the study, wrote the manuscript]
  5. Ryyppö, E., Glerean, E., Brattico, E., Saramäki, J., Korhonen, O. (in press).
    Regions of Interest as nodes of dynamic functional brain networks OA
    Network Neuroscience 10.1162/NETN_a_00047
    arXiv link: https://arxiv.org/abs/1710.04056

    [Designed the study and helped with the analysis, wrote the manuscript]
  6. Saarimäki, H., Ejtehadian, L., Glerean, E., Jaaskelainen, I.P., Vuilleumier, P., Sams, M., Nummenmaa L. (inpress)
    Distributed Affective Space Represents Multiple Emotion Categories Across The Brain OA
    Social Cognitive & Affective Neuroscience 10.1093/scan/nsy018
    biorXiv link: http://biorxiv.org/content/early/2017/04/05/123521

    [Developed analysis methods and performed part of the analysis, wrote the manuscript]
  7. Nummenmaa, L., Lahnakoski, J., Glerean, E. (in press).
    Sharing the social world via intersubject neural synchronization
    Current Opinion in Psychology doi: 10.1016/j.copsyc.2018.02.021 [PDF]
    [Planned and wrote the manuscript]
  8. Smirnov, D., Lachat, F., Peltola, T., Lahnakoski, J.M., Koistinen, O.P., Glerean, E., Vehtari, A., Hari, R., Sams, M. and Nummenmaa, L. (2017).
    Brain-to-brain hyperclassification reveals action-specific motor mapping of observed actions in humans OA
    PloS one, 12(12), p.e0189508. doi.org/10.1371/journal.pone.0189508
    [Developed analysis methods and helped with the analysis, wrote the manuscript]
  9. Bacha-Trams, M., Glerean, E., Dunbar, R., Lahnakoski, J. M., Ryyppö, E., Sams, M., Jääskeläinen, I. P. (2017).
    Differential inter-subject correlation of brain activity when kinship is a variable in moral dilemma OA
    Scientific Reports, 7(1), 14244. doi:10.1038/s41598-017-14323-x
    Human brain responds differently to non-altruistic behavior towards genetic vs. adopted siblings
    biorXiv link: http://biorxiv.org/content/early/2017/02/28/112383

    [Developed analysis methods and performed all analysis, wrote the manuscript]
  10. Alakörkkö, T., Saarimäki, H., Glerean, E., Saramäki, J., Korhonen, O. (2017)
    Effects of spatial smoothing on functional brain networksOA
    European Journal of neuroscience doi:10.1111/ejn.13717
    arXiv link: https://arxiv.org/abs/1705.02141

    [Contributed to the design of the study, wrote the manuscript]
  11. Karjalainen T., Karlsson H., Lahnakoski J., Glerean E., Nuutila P., Jääskeläinen I.P., Hari R., Sams M., Nummenmaa L. (in press)
    Dissociable Roles of Cerebral μ-Opioid and Type 2 Dopamine Receptors in Vicarious Pain: A Combined PET–fMRI Study
    Cerebral Cortex 10.1093/cercor/bhx129 [PDF]
    [Helped with data analysis, wrote the manuscript]
  12. Korhonen, Onerva, Saarimäki, H., Glerean, E., Sams M., Saramäki J. (2017)
    Consistency of Regions of Interest as nodes of fMRI functional brain networks OA
    Network neuroscience, 1(3), 254-274 doi:10.1162/NETN_a_0001
    arXiv link: https://arxiv.org/abs/1704.07635

    [Designed the study, analysed part of the data, wrote the manuscript]
  13. Komulainen, E., Glerean, E., Meskanen, K., Heikkilä, R., Nummenmaa, L., Raij, T.T., Lahti, J., Jylhä, P., Melartin, T., Isometsä, E., Ekelund, J. (in press)
    Single dose of mirtazapine modulates whole-brain functional connectivity during emotional narrative processing
    Psychiatry Research: Neuroimaging doi:10.1016/j.pscychresns.2017.03.009 [pdf]
    [Developed methods for dynamic functional connectivity, performed all connectivity analysis, did the figures, wrote the manuscript]
  14. Salmi J., Koistinen OP., Glerean E., Jylänki P., Vehtari A., Jääskeläinen I. P., Mäkelä S., Nummenmaa L., Nummi-Kuisma K., Nummi I., Sams M. (in press)
    Distributed neural signatures of natural audiovisual speech and music in the human auditory cortex
    Neuroimage doi:10.1016/j.neuroimage.2016.12.005 [pdf]
    [Designed the study, prepared the stimuli, fMRI preprocessing and visualization of results, wrote the manuscript]
  15. Nummenmaa, L., Oksama, L., Glerean, E., Hyönä, J. (in press)
    Cortical Circuit for Binding Object Identity and Location During Multiple-Object Tracking
    Cerebral Cortex doi:10.1093/cercor/bhw380 [pdf]
    [Took care of all connectivity analysis, wrote the manuscript]
  16. Kujala, R., Glerean, E., Pan, R.K., Jääskeläinen, I.P., Sams, M.m Saramäki, J. (2016)
    Graph coarse-graining reveals differences in the module-level structure of functional brain networks
    European Journal of Neuroscience doi:10.1111/ejn.13392 [pdf]
    3D Nifti maps of the subnetwork parcellations in Neurovault: http://neurovault.org/collections/1080/
    Code: https://github.com/CxAalto/verkko/
    [Planned the paper, helped in data analysis and interpretation of the results, wrote the manuscript]
  17. Nummenmaa, L., Suvilehto, J., Glerean, E., Santtila, P., Hietanen, J.K. (in press)
    Topography of Human Erogenous Zones
    Archives of Sexual Behavior [pdf]
    [Helped setting up tools for data collection and analysis, devised and performed the analysis of temporal dynamics, wrote the manuscript]
  18. Glerean, E., Pan, R.K., Salmi, J., Kujala, R., Lahnakoski, J.M., Roine, U., Nummenmaa, L., Leppämäki, S., Nieminen-von Wendt, T., Tani, P., Saramäki, J., Sams, M., Jääskeläinen, I.P. (2016)
    Reorganization of functionally connected brain subnetworks in high-functioning autism
    Human Brain Mapping. doi:10.1002/hbm.23084 [pdf]
    arXiv link: http://arxiv.org/abs/1503.04851

    3D Nifti maps of the results in Neurovault: http://neurovault.org/collections/437/
    Code: https://github.com/eglerean/hfASDmodules 10.5281/zenodo.44657
    [Performed all analysis except detection of subnetworks and group consensus, wrote the manuscript]
  19. Jääskeläinen I., Halme H.L., Agam Y., Glerean E., Lahnakoski J., Sams M., Tapani K., Ahveninen J., and Manoach D. (2016)
    Neural mechanisms supporting evaluation of others' errors in real-life like conditions OA
    Scientific Reports. doi:10.1038/srep18714
    [Helped with web-based annotation software and fMRI analysis, wrote the manuscript]
  20. Hietanen, J.K., Glerean, E., Hari, R., Nummenmaa, L. (2016)
    Bodily maps of emotions across child development
    Developmental Science. doi:10.1111/desc.12389 [pdf]
    [Performed data analysis, especially the similarity analysis between children and adults, wrote the manuscript]
  21. Suvilehto, J., Glerean, E., Dunbar, R.I.M., Hari, R., Nummenmaa, L. (2016)
    Topography of social touching depends on emotional bonds between humans OA
    Proceedings of the National Academy of Sciences of United States of America doi:10.1073/pnas.1519231112
    [Helped on the tool for data collection, helped in data analysis, performed network analyses, wrote the manuscript]
  22. Smirnov, D., Glerean E., Lahnakoski J.M., Salmi J, Jääskeläinen I.P., Sams M., Nummenmaa L., (2014)
    Fronto-parietal network supports context-dependent speech comprehension OA
    Neuropsychologia doi:10.1016/j.neuropsychologia.2014.09.007
    [Performed inter-subject correlation analysis, did the audio recording of the stimuli, wrote the manuscript]
  23. Nummenmaa L., Saarimäki H.; Glerean E.; Gotsopoulos A.; Jääskeläinen I.P.; Hari R.; Sams M. (2014)
    Emotional Speech Synchronizes Brains Across Listeners And Engages Large-Scale Dynamic Brain Networks OA
    Neuroimage doi:10.1016/j.neuroimage.2014.07.063
    [Performed all dynamic functional connectivity and intersubject synchronization analysys and statistics, developed software, visualized the networks, helped in stimulus preparation and annotation, wrote the manuscript]
  24. Lahnakoski J.M., Glerean E., Jääskeläinen I.P., Hyönä J., Hari R., Sams M., Nummenmaa L. (2014)
    Synchronous brain activity across individuals underlies shared psychological perspectives OA
    Neuroimage doi:10.1016/j.neuroimage.2014.06.022
    [Helped in fMRI data analysis, wrote the manuscript]
  25. Salmi J., Glerean E., Jääskeläinen I.P., Lahnakoski J.M., Kettunen J., Lampinen J., Tikka P., Sams M. (2014)
    Posterior parietal cortex activity reflects the significance of others' actions during natural viewing
    Human Brain Mapping doi:10.1002/hbm.22510 [pdf]
    [Devised tools and code for annotations, helped in fMRI data analysis, wrote the manuscript]
  26. Nummenmaa L., Glerean E., Hari R., Hietanen J.K. (2013)
    Bodily maps of emotions OA
    Proceedings of the National Academy of Sciences of United States of America doi:10.1073/pnas.1321664111
    [Built the web-tool for data collection, analysed and visualised the data, wrote the manuscript]
  27. Nummenmaa L., Smirnov D., Lahnakoski J., Glerean E., Jääskeläinen I.P., Sams M., Hari R. (2013)
    Mental Action Simulation Synchronizes Action-Observation Circuits Across Individuals. OA
    Journal of Neuroscience doi:10.1523/JNEUROSCI.0352-13.2014
    [Did the inter-subject phase synchronization analysis, did the static and dynamic functional connectivity analysis, wrote the manuscript]
  28. Salmi J., Roine U. Glerean E., Lahnakoski J., Nieminen-von Wendt T., Tanid P., Leppämäkie S., Nummenmaa L., Jääskeläinen I.P., Carlson S., Rintahaka P., Sams M. (2013)
    The brains of high functioning autistic individuals do not synchronize with those of others. OA
    Neuroimage: Clinical. [Epub ahead of print] doi:10.1016/j.nicl.2013.10.011
    [Did the funcional connectivity analysis of the data, wrote the manuscript]
  29. Brattico E., Tupala T., Glerean E., Tervaniemi M. (2013)
    Modulated neural processing of Western harmony in folk musicians.
    Psychophysiology. 2013 May 9;. [Epub ahead of print] doi:10.1111/psyp.12049 [pdf]
    [Did most of the analysis and visualized the data, wrote the manuscript]
  30. Lahnakoski, J.M., Glerean, E., Salmi, J., Jääskeläinen, I.P., Sams, M., Hari, R., & Nummenmaa, L. (2012)
    Naturalistic fMRI Mapping Reveals Superior Temporal Sulcus as the Hub for the Distributed Brain Network for Social Perception. OA
    Frontiers in Human Neuroscience, 6: 233. doi:10.3389/fnhum.2012.00233 [pdf]
    [Built the online flash ActionSCript tool for annotating the stimulus clips and wrote the manuscript]
  31. Viinikainen, M., Glerean, E., Jääskeläinen, I.P., Kettunen, J., Sams, M. & Nummenmaa, L. (2012)
    Nonlinear neural representation of emotional feelings elicited by dynamic naturalistic stimulation. OA
    Open Journal of Neuroscience, vol 2. access article [pdf]
    [Built the online flash ActionSCript tool for valence/arousal continous ratings, wrote the manuscript and helped with fMRI data collection]
  32. Nummenmaa, L., Glerean, E., Viinikainen, M., Jääskeläinen, I.P., Hari, R., & Sams, M. (2012)
    Emotions promote social interaction by synchronizing brain activity across individuals. OA
    Proceedings of the National Academy of Sciences of United States of America doi: 10.1073/pnas.1206095109 [pdf]
    [Did the time-varying intersubject correlation and representational similarity analysis, built the online flash ActionSCript tool for valence/arousal continous ratings, wrote the manuscript and helped with fMRI data collection]
  33. Glerean, E., Salmi, J., Lahnakoski, J.M., Jääskeläinen, I.P., Sams, M. (2012).
    Functional Magnetic Resonance Imaging Phase Synchronization as a Measure of Dynamic Functional Connectivity. OA
    Brain connectivity. doi:10.1089/brain.2011.0068 [pdf]
    [Firt author paper, I came up with the method and did all theoretical and analysis part]
  34. Lahnakoski, J. M., Salmi, J., Jääskeläinen, I. P., Lampinen, J., Glerean, E., Tikka, P., & Sams, M. (2012).
    Stimulus-Related Independent Component and Voxel-Wise Analysis of Human Brain Activity during Free Viewing of a Feature Film. OA
    PLoS ONE, 7(4), e35215. Public Library of Science. doi:10.1371/journal.pone.0035215 [pdf]
    [Helped with annotations and wrote the manuscript]
  35. Alluri, V., Toiviainen, P., Jääskeläinen, I. P., Glerean, E., Sams, M., & Brattico, E. (2012).
    Large-scale brain networks emerge from dynamic processing of musical timbre, key and rhythm.
    NeuroImage, 59(4):3677-89. doi:10.1016/j.neuroimage.2011.11.019 [pdf]
    [Helped in the statistical analysis, methods, figures, did the intersubject correlation and wrote the manuscript]
  36. Vuust, P., Brattico, E., Glerean, E., Seppänen, M., Pakarinen, S., Tervaniemi, M., & Näätänen, R. (2011).
    New fast mismatch negativity paradigm for determining the neural prerequisites for musical ability.
    Cortex, 47(9):1091-8. doi:10.1016/j.cortex.2011.04.026
    [Did most of the analysis, figures and wrote the manuscript]
  37. Brattico, E., Jacobsen, T., De Baene, W., Glerean, E., & Tervaniemi, M. (2010).
    Cognitive vs. affective listening modes and judgments of music--an ERP study.
    Biological Psychology, 85(3), 393-409. Elsevier B.V. doi:10.1016/j.biopsycho.2010.08.014
    [Did most of the analysis, figures and wrote the manuscript]

Doctoral dissertation


Glerean, E. (2015) Dynamic similarity of brain activity in humans: from single areas to functional networks OA Aalto University publication series DOCTORAL DISSERTATIONS, 199/2015. ISBN: 978-952-60-6542-7 (electronic) 978-952-60-6541-0 (printed). [pdf]

Citable software

Glerean E. Mantel test—Matlab implementation. Figshare. doi:10.6084/m9.figshare.1008724.v3